pyMaBoSS

pyMaBoSS is a python API for the MaBoSS software. It can be used inside the Colomoto docker. The API is loaded by running the following line in Python:

import maboss

Once loaded, it allows you to quickly load a MaBoSS model:

sim = maboss.load("metastasis.bnd", "metastasis.cfg")

And then to simulate the model and plot the simulation results:

res = sim.run()
res.plot_piechart()
Simulation result

Indices and tables