Loading
Function to import maboss models in Python.
Multiple types are supported: - MaBoSS format (bnd + cfg files) - SBML format (xml files) - BNet format (bnet files) - TabularQual format (xlsx files)
- maboss.gsparser.load(bnd_filename, *cfg_filenames, **extra_args)[source]
Loads a network from a MaBoSS format file.
- Parameters:
bnd_filename (str) – Network file
cfg_filename (str) – Configuraton file
- Return type:
- maboss.gsparser.loadBNet(bnet_filename, cfg_filename=None, cmaboss=False)[source]
Loads a network from a MaBoSS format file.
- Parameters:
bnet_filename (str) – Network file
cfg_filename (str) – Configuration file
- Return type:
- maboss.gsparser.loadSBML(sbml_filename, cfg_filename=None, use_sbml_names=False, cmaboss=False)[source]
Loads a network from a SBML format file.
- Parameters:
sbml_filename (str) – Network file
cfg_filename (str) – Configuraton file
use_sbml_names (bool) – Use SBML names instead of IDs to name nodes
- Return type:
- maboss.gsparser.loadTabularQual(tabularqual_filename, cmaboss=False)[source]
Loads a network from a TabularQual format file. :param str tabularqual_filename: Network file :rtype:
Simulation